cotengra.pathfinders.path_igraph

igraph based pathfinders.

Module Contents

Functions

oe_to_igraph(inputs, output, size_dict[, ...])	Convert opt_einsum format to igraph graph incl. weights.
igraph_subgraph_find_membership(inputs, output, size_dict)
trial_igraph_dendrogram(inputs, output, size_dict[, ...])	A single, repeatable, igraph trial run. This is for igraph methods that
trial_spinglass(inputs, output, size_dict[, ...])

Attributes

igraph_to_tree
trial_igraph_partition

cotengra.pathfinders.path_igraph.oe_to_igraph(inputs, output, size_dict, weight_nodes='const', weight_edges='log')

Convert opt_einsum format to igraph graph incl. weights.

cotengra.pathfinders.path_igraph.igraph_subgraph_find_membership(inputs, output, size_dict, weight_nodes='const', weight_edges='log', method='spinglass', parts=2, seed=None, **igraph_opts)

cotengra.pathfinders.path_igraph.igraph_to_tree

cotengra.pathfinders.path_igraph.trial_igraph_partition

cotengra.pathfinders.path_igraph.trial_igraph_dendrogram(inputs, output, size_dict, weight_nodes='const', weight_edges='log', random_strength=0.1, method='betweenness', **kwargs)

A single, repeatable, igraph trial run. This is for igraph methods that naturally produce a dendrogram (== ssa_path).

cotengra.pathfinders.path_igraph.trial_spinglass(inputs, output, size_dict, icool_fact=0.01, igamma=0.01, **kwargs)